About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_39938919_39941483_R

Intron Information:

Intron Rank:
4
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
39938919 - 39941483
Intron Length:
2565

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTATGTTTT
5'SS Class:
strong_major
3'SS Sequence:
TTGTTGTTTGCAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
ATTTTAC
U12 Branch Point Sequence:
GTGTTCTGAGCA
Flanking Amino Acid:
SVSIMDGSYEGQLSGQNQHT
Intron Amino Acid Position:
223

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
91.1
0.97
0.8
89.6
24.2
Major BPS
77.8
0.69
0.9
69.4
37.3
Major PPT
85.6
0.8
0.9
80.6
37
Minor 5ss
57.8
0.27
2.3
75.5
40.6
Minor BPS
53.2
0.1
1.7
64.79
41.4

Associated Gene:

Gene:
ENTPD5
Ensembl Gene ID:
ENSAPLG00000014079
Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000014717
39930482 - 39945572
15091