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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39941560_39941935_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
39941560 - 39941935

Intron Length:
376

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAATACTA

5'SS Class:
strong_major

3'SS Sequence:
TTTCTTTCTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCATTAT

U12 Branch Point Sequence:
GAATCATTATTT

Flanking Amino Acid:
EEKAQALLLEVKEVFEESPF

Intron Amino Acid Position:
198

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81
0.73
1
73.6
37

Major BPS
72.1
0.55
1.1
62.3
43.7

Major PPT
93.4
0.98
0.5
92.6
17.4

Minor 5ss
35.6
-1.6
3.2
48.3
47.2

Minor BPS
51.5
0.13
1.9
68.5
41.9

Associated Gene:

Gene:
ENTPD5

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

39930418 - 39948545
18128

39930482 - 39945572
15091