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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39949428_39950136_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39949428 - 39950136

Intron Length:

709

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGGGAG

5'SS Class:

major

3'SS Sequence:

TCTGTTTTCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TGTTTCTTAATT

Flanking Amino Acid:

AKQGQEKAQEIEKLKKELVH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

60.2

40.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

84.2

0.77

0.8

79.9

32.1

Minor 5ss

-3.2

3.4

27.8

44.2

Minor BPS

84.3

1.15

0.9

92.31

29.9

Associated Gene:

Gene:

BBOF1

Ensembl Gene ID:

ENSAPLG00000014370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014975

39948144 - 39961739

13596