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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39958280_39959069_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39958280 - 39959069

Intron Length:

790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTATTTTAA

5'SS Class:

major

3'SS Sequence:

CTGTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TTCCTCCTAATG

Flanking Amino Acid:

RDLEEAEKCYGEKAQFEKVD

Intron Amino Acid Position:

433

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

65.7

36.2

Major BPS

81.9

0.79

0.9

80.1

Major PPT

82.9

0.74

0.9

80.3

37.3

Minor 5ss

45.2

-0.5

2.5

49.1

47.1

Minor BPS

53.2

-0

1.8

60.92

41.4

Associated Gene:

Gene:

BBOF1

Ensembl Gene ID:

ENSAPLG00000014370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014975

39948144 - 39961739

13596