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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39963582_39963894_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39963582 - 39963894

Intron Length:

313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTGC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAC

U12 Branch Point Sequence:

AACATCTGACCC

Flanking Amino Acid:

RGDTNFYGKQGVQFYTQLKT

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.1

73.2

39.3

Major BPS

72.6

0.56

0.9

63.1

35.8

Major PPT

83.2

0.75

0.7

76.2

32.4

Minor 5ss

46.1

-0.4

2.6

62.1

42.6

Minor BPS

45.6

-0.3

1.7

51.19

39.4

Associated Gene:

Gene:

ALDH6A1

Ensembl Gene ID:

ENSAPLG00000019703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019641

39963477 - 39966679

3203