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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39963994_39964123_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39963994 - 39964123

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

GTGTGATTAATA

Flanking Amino Acid:

KYSHLVDVGQVGVNVPIPVP

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

79.4

29.7

Major BPS

83.9

0.84

73.9

41.3

Major PPT

78.1

0.63

0.8

76.9

31.9

Minor 5ss

46.6

-0.4

2.4

59.3

45.3

Minor BPS

51.6

0.05

65.12

41.5

Associated Gene:

Gene:

ALDH6A1

Ensembl Gene ID:

ENSAPLG00000019703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019641

39963477 - 39966679

3203