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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39964304_39965578_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39964304 - 39965578

Intron Length:

1275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACATAA

5'SS Class:

major

3'SS Sequence:

TTTGTCTTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCTAC

U12 Branch Point Sequence:

GTTTCCTACAGT

Flanking Amino Acid:

VGPTILANVKPNMTCYKEEI

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

73.9

32.9

Major BPS

58.9

0.22

1.3

58.4

Major PPT

79.9

0.67

77.1

37.1

Minor 5ss

42.8

-0.8

2.9

48.2

Minor BPS

49.5

0.05

2.4

76.24

46.3

Associated Gene:

Gene:

ALDH6A1

Ensembl Gene ID:

ENSAPLG00000019703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019641

39963477 - 39966679

3203