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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39972685_39973030_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39972685 - 39973030

Intron Length:

346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGCCAC

5'SS Class:

major

3'SS Sequence:

TTTTCCAAACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

TTTTCCAAACCA

Flanking Amino Acid:

VAEFAASFKSPITSSPPKWM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.38

1.2

56.2

43.1

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

71.2

0.48

64.9

40.3

Minor 5ss

40.2

-1.1

3.1

51.7

Minor BPS

52.5

0.08

2.2

76.13

41.2

Associated Gene:

Gene:

LIN52

Ensembl Gene ID:

ENSAPLG00000014829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015452

39972374 - 40012622

40249