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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40082987_40083318_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40082987 - 40083318

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCAG

5'SS Class:

major

3'SS Sequence:

GACCCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GATTTTTGAATC

Flanking Amino Acid:

GGLDEQVDWNWYDILSPGEM

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

62.2

43.7

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

65.5

0.35

57.6

38.2

Minor 5ss

30.2

-2.3

3.2

35.3

42.3

Minor BPS

0.26

1.3

64.68

34.7

Associated Gene:

Gene:

ABCD4

Ensembl Gene ID:

ENSAPLG00000014842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015488

40081399 - 40097514

16116