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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40083704_40084216_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40083704 - 40084216

Intron Length:

513

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

CTGTACTTAAGC

Flanking Amino Acid:

YPLKEIYPVSGPADDERIVR

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.6

39.1

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

83.8

0.76

0.7

76.8

31.9

Minor 5ss

-2.2

3.3

40.9

45.3

Minor BPS

57.9

0.23

1.9

66.9

44.7

Associated Gene:

Gene:

ABCD4

Ensembl Gene ID:

ENSAPLG00000014842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015488

40081399 - 40097514

16116