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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40084547_40084829_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40084547 - 40084829

Intron Length:

283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGACT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAGCAT

U12 Branch Point Sequence:

GCAGGCTTAGCA

Flanking Amino Acid:

VLGGLWESTRGSIQMLTCFG

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

76.1

39.5

Major BPS

63.3

0.33

1.5

41.2

Major PPT

77.9

0.63

0.9

37.3

Minor 5ss

34.5

-1.8

3.2

41.9

44.5

Minor BPS

45.4

-0.3

2.1

52.61

45.3

Associated Gene:

Gene:

ABCD4

Ensembl Gene ID:

ENSAPLG00000014842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015488

40081399 - 40097514

16116