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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40093401_40093657_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40093401 - 40093657

Intron Length:

257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGCCAA

U12 Branch Point Sequence:

TCTGGCTTAGCC

Flanking Amino Acid:

LAYYTYQCFHSTGWLGPVSI

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

77.9

31.9

Major BPS

48.1

-0.1

1.3

56.4

40.6

Major PPT

0.81

0.7

80.9

24.2

Minor 5ss

30.5

-2.2

3.5

41.8

45.1

Minor BPS

50.2

-0

2.1

65.7

46.1

Associated Gene:

Gene:

ABCD4

Ensembl Gene ID:

ENSAPLG00000014842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015488

40081399 - 40097514

16116