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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40093775_40096886_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40093775 - 40096886

Intron Length:

3112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAGGCTGC

5'SS Class:

weak_major

3'SS Sequence:

TTGTGTTGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

TGGGCTTTAACA

Flanking Amino Acid:

LHVLHEDIDNPDQRISQDVE

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.3

0.06

1.4

46.3

45.1

Major BPS

77.3

0.68

79.3

29.4

Major PPT

67.7

0.4

1.2

65.2

45.5

Minor 5ss

44.7

-0.6

3.2

62.4

42.9

Minor BPS

68.8

0.59

1.4

71.61

40.9

Associated Gene:

Gene:

ABCD4

Ensembl Gene ID:

ENSAPLG00000014842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015488

40081399 - 40097514

16116