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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40116071_40117901_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40116071 - 40117901

Intron Length:

1831

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACGAGAA

U12 Branch Point Sequence:

TTCTTCTTCCTC

Flanking Amino Acid:

GIAAFYFSQGTSKAVSKGDF

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

75.1

35.1

Major BPS

43.5

-0.4

32.4

32.1

Major PPT

85.3

0.79

0.7

77.3

31.5

Minor 5ss

31.7

-2.1

3.4

46.2

Minor BPS

41.8

-0.6

3.5

64.76

Associated Gene:

Gene:

SYNDIG1L

Ensembl Gene ID:

ENSAPLG00000015081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042888

40115912 - 40119635

3724

ENSAPLT00000015709

40115912 - 40123384

7473