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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40118040_40119104_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40118040 - 40119104

Intron Length:

1065

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

CAGCCCTGACTT

Flanking Amino Acid:

VEEEELQEYESDSSSDSESE

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.5

33.5

Major BPS

78.6

0.71

79.6

32.9

Major PPT

87.5

0.84

0.7

83.2

25.1

Minor 5ss

-1

56.7

47.6

Minor BPS

47.1

-0.1

1.8

59.31

44.1

Associated Gene:

Gene:

SYNDIG1L

Ensembl Gene ID:

ENSAPLG00000015081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042888

40115912 - 40119635

3724

ENSAPLT00000015709

40115912 - 40123384

7473