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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40158287_40158402_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40158287 - 40158402

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGCCT

5'SS Class:

major

3'SS Sequence:

TTGCCTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCCT

U12 Branch Point Sequence:

CTGTGTTTGCCT

Flanking Amino Acid:

QVYLSQSCVKRLLEIAEGSE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

44.2

Major BPS

29.7

-1.2

4.2

71.4

45.1

Major PPT

78.4

0.64

0.9

72.7

37.5

Minor 5ss

-2.1

3.6

47.9

47.8

Minor BPS

39.2

-0.7

3.6

65.81

45.8

Associated Gene:

Gene:

ISCA2

Ensembl Gene ID:

ENSAPLG00000022258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018967

40157830 - 40158705

876

ENSAPLT00000018932

40157677 - 40158678

1002