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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40158522_40158602_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40158522 - 40158602

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGGTGGTG

5'SS Class:

weak_major

3'SS Sequence:

TTTTCTCCCCGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CGGTGCTGAGGC

Flanking Amino Acid:

GCRARYRPRGGSWRPAPPLR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.3

0.17

1.1

49.4

41.2

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

62.7

0.29

1.7

70.1

36.5

Minor 5ss

26.2

-2.7

3.7

33.6

44.4

Minor BPS

38.5

-0.8

2.1

43.46

Associated Gene:

Gene:

ISCA2

Ensembl Gene ID:

ENSAPLG00000022258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018967

40157830 - 40158705

876