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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40165388_40168813_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40165388 - 40168813

Intron Length:

3426

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCAGGGCAG

5'SS Class:

major

3'SS Sequence:

CTCCTCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAC

U12 Branch Point Sequence:

ACTGCCTCACCC

Flanking Amino Acid:

ATGNRCVNLSDINECDEVGG

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

53.8

43.3

Major BPS

66.1

0.4

1.2

69.1

37.9

Major PPT

82.2

0.72

0.7

76.4

25.7

Minor 5ss

18.5

-3.6

25.2

38.6

Minor BPS

48.9

-0.1

1.9

60.61

44.7

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033005

40165221 - 40173098

7878