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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40167720_40167845_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40167720 - 40167845

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCTGAGGAG

5'SS Class:

major

3'SS Sequence:

CTGCGTGGGTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACATGAC

U12 Branch Point Sequence:

TGGACATGACCC

Flanking Amino Acid:

GVSTRASRDCSGSPSPSAEA

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.4

0.32

1.3

51.3

Major BPS

53.4

0.08

1.1

45.4

37.1

Major PPT

43.1

-0.3

1.7

45.4

45.8

Minor 5ss

12.6

-4.3

3.7

19.4

38.1

Minor BPS

-0.4

54.35

42.8

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021177

40167485 - 40169265

1781