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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40168632_40168808_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40168632 - 40168808

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCAGGTGAG

5'SS Class:

major

3'SS Sequence:

AGATGCCCTGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACAGCAT

U12 Branch Point Sequence:

TCGCTCGCAGAT

Flanking Amino Acid:

GNRCVNLSGREYEIHLDVCW

Intron Amino Acid Position:

804

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.2

65.3

43.5

Major BPS

46.8

-0.2

1.4

53.7

41.6

Major PPT

47.1

-0.1

1.7

40.8

Minor 5ss

19.9

-3.5

3.9

21.7

37.9

Minor BPS

36.3

-0.9

2.1

50.25

43.5

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028475

40165221 - 40193193

27973