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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40168643_40168804_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40168643 - 40168804

Intron Length:

162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

GTGTCGCTCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

ATTCCCACAGCA

Flanking Amino Acid:

NRCVNLSGRADALEEYEIHL

Intron Amino Acid Position:

1248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

71.4

40.3

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

68.9

0.42

61.7

39.9

Minor 5ss

35.1

-1.7

3.1

48.4

47.3

Minor BPS

47.1

-0.2

65.38

40.2

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021177

40167485 - 40169265

1781

ENSAPLT00000015838

40163450 - 40214772

51323