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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40168668_40168826_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40168668 - 40168826

Intron Length:

159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAACCTC

5'SS Class:

weak_major

3'SS Sequence:

AGGATTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTGAC

U12 Branch Point Sequence:

TCTTCCAGAGGA

Flanking Amino Acid:

LVLDATGNRCHPLRVSLADA

Intron Amino Acid Position:

984

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.7

0.09

1.1

49.4

41.5

Major BPS

48.3

-0.1

1.3

40.8

41.4

Major PPT

62.6

0.28

54.4

40.8

Minor 5ss

38.3

-1.3

3.3

51.1

45.7

Minor BPS

44.7

-0.4

2.2

61.22

44.5

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033171

40165221 - 40195232

30012