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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40169930_40170046_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40169930 - 40170046

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCCGG

5'SS Class:

major

3'SS Sequence:

GCCCCTCGGCCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCCCAT

U12 Branch Point Sequence:

TTTGTCCCATCT

Flanking Amino Acid:

ETYPCPIAGTVEYQEVCPLG

Intron Amino Acid Position:

874

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

54.5

49.7

Major BPS

54.5

0.11

1.4

66.4

42.2

Major PPT

56.5

0.15

1.1

49.2

39.3

Minor 5ss

35.9

-1.6

3.3

47.2

48.2

Minor BPS

45.9

-0.2

2.1

72.42

44.5

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033171

40165221 - 40195232

30012