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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40169930_40170052_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40169930 - 40170052

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGG|GCACAGGTA

5'SS Class:

major

3'SS Sequence:

GCCCCTCGGCCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCCCAT

U12 Branch Point Sequence:

TTTGTCCCATCT

Flanking Amino Acid:

NCETYPCPIAVEYQEVCPLG

Intron Amino Acid Position:

1131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.2

0.27

1.3

61.5

Major BPS

54.5

0.11

1.4

66.4

42.2

Major PPT

56.5

0.15

1.1

49.2

39.3

Minor 5ss

20.3

-3.4

4.4

28.1

Minor BPS

45.9

-0.2

2.1

72.42

44.5

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015838

40163450 - 40214772

51323