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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40170228_40170372_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40170228 - 40170372

Intron Length:

145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGGAG

5'SS Class:

major

3'SS Sequence:

AGAGGGCGCCGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGCCAT

U12 Branch Point Sequence:

CTGTCTTGCAGA

Flanking Amino Acid:

QPRAAMAPAGSHAAQPSDSM

Intron Amino Acid Position:

1073

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

63.9

42.4

Major BPS

53.4

0.08

1.4

64.2

Major PPT

39.1

-0.6

1.6

37.1

Minor 5ss

28.1

-2.5

3.4

43.5

Minor BPS

44.1

-0.4

2.1

55.13

44.3

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015838

40163450 - 40214772

51323