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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40170559_40170866_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40170559 - 40170866

Intron Length:

308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

CCTTGCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TTGCTCACACCT

Flanking Amino Acid:

ESSASGHYCVDVNECELMVA

Intron Amino Acid Position:

1021

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

72.3

39.5

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

76.7

0.6

0.8

69.5

31.2

Minor 5ss

34.1

-1.8

2.9

36.4

40.6

Minor BPS

44.6

-0.3

66.28

44.1

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015838

40163450 - 40214772

51323

ENSAPLT00000033171

40165221 - 40195232

30012