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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40170719_40170870_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40170719 - 40170870

Intron Length:

152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTGGGTAAG

5'SS Class:

weak_major

3'SS Sequence:

TCCATGCACTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATCCAT

U12 Branch Point Sequence:

TATCCATGCACT

Flanking Amino Acid:

YESSASGHYCNPRHRQEPCC

Intron Amino Acid Position:

638

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.8

0.14

1.4

55.8

44.9

Major BPS

69.5

0.49

1.2

78.7

34.9

Major PPT

47.2

-0.1

1.7

40.5

Minor 5ss

29.2

-2.4

2.9

27.8

36.7

Minor BPS

47.8

-0

2.2

73.44

42.4

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028475

40165221 - 40193193

27973