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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40170993_40171866_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40170993 - 40171866

Intron Length:

874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTGCTGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

ACTGCTGTGACT

Flanking Amino Acid:

KHSQETDDCVDIDECANETL

Intron Amino Acid Position:

979

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

0.22

1.2

52.4

43.3

Major PPT

71.9

0.49

0.9

64.8

36.4

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

48.6

-0

2.1

68.38

43.3

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015838

40163450 - 40214772

51323

ENSAPLT00000028475

40165221 - 40193193

27973