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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40172368_40172460_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40172368 - 40172460

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCACGCAGC

5'SS Class:

major

3'SS Sequence:

GCACACCCATAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGGTGAT

U12 Branch Point Sequence:

GATGCCACCATG

Flanking Amino Acid:

NPSLQPPGSGAVAKCPVRDR

Intron Amino Acid Position:

484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.3

64.4

43.8

Major BPS

57.3

0.18

1.3

48.8

46.3

Major PPT

48.1

-0.1

1.1

46.9

35.1

Minor 5ss

27.9

-2.5

41.7

Minor BPS

38.5

-1

2.1

42.53

42.5

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028475

40165221 - 40193193

27973