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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40174517_40174969_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40174517 - 40174969

Intron Length:

453

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAAGCTT

5'SS Class:

major

3'SS Sequence:

CCCTGTCACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

TTCCCTGTCACA

Flanking Amino Acid:

FAMGPRGQCEDVDECLVEGT

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

71.9

39.4

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

66.6

0.37

0.9

60.2

34.5

Minor 5ss

30.6

-2.2

3.6

46.7

48.6

Minor BPS

46.4

-0.2

2.3

63.93

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033171

40165221 - 40195232

30012