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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40175114_40175287_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40175114 - 40175287

Intron Length:

174

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCACCGGGC

5'SS Class:

major

3'SS Sequence:

AGGAAGGCTTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCACAT

U12 Branch Point Sequence:

ATCTCCTGCAGC

Flanking Amino Acid:

QSCQGEWGSPGLVSFYINEC

Intron Amino Acid Position:

714

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.4

0.25

1.3

40.8

Major BPS

53.7

0.09

1.1

60.7

37.6

Major PPT

51.5

0.03

1.1

43.7

46.7

Minor 5ss

23.9

-3

4.4

37.9

42.4

Minor BPS

47.2

-0.2

2.2

61.28

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015838

40163450 - 40214772

51323