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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40175240_40175311_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40175240 - 40175311

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTCAGGGTG

5'SS Class:

weak_major

3'SS Sequence:

TCCCTCCCTTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

GTCTCCCCATTC

Flanking Amino Acid:

TLVVSESKQSSLPCACTRGC

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.5

0.08

1.4

44.9

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

57.9

0.18

1.6

69.3

31.4

Minor 5ss

31.2

-2.2

3.7

48.2

47.3

Minor BPS

44.4

-0.4

56.1

42.4

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033171

40165221 - 40195232

30012

ENSAPLT00000028475

40165221 - 40193193

27973