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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40175435_40175718_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40175435 - 40175718

Intron Length:

284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTCAG

5'SS Class:

major

3'SS Sequence:

TGCCTGAGCACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CCTGCCTGAGCA

Flanking Amino Acid:

ALHPGHLRCMDEDECLQDPC

Intron Amino Acid Position:

665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

61.5

44.7

Major BPS

66.3

0.4

1.1

41.8

Major PPT

0.22

53.1

40.4

Minor 5ss

39.2

-1.2

2.8

45.3

Minor BPS

49.1

-0

1.9

59.78

46.1

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015838

40163450 - 40214772

51323