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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40178486_40179099_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40178486 - 40179099

Intron Length:

614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TTTTCCCTCACA

Flanking Amino Acid:

NCEACPVPGSEAFKEICPAG

Intron Amino Acid Position:

534

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

70.4

35.4

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

85.8

0.8

0.7

80.5

24.9

Minor 5ss

26.8

-2.7

2.8

31.2

42.4

Minor BPS

0.5

2.1

84.22

35.9

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028475

40165221 - 40193193

27973

ENSAPLT00000015838

40163450 - 40214772

51323