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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40179265_40179510_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40179265 - 40179510

Intron Length:

246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

CCTTGCGTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

AGGCACTGACCC

Flanking Amino Acid:

MLDPSRSHCISDKAVSMEQG

Intron Amino Acid Position:

479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

72.2

37.5

Major BPS

61.3

0.28

52.7

34.2

Major PPT

76.5

0.6

0.9

72.4

37.7

Minor 5ss

38.2

-1.3

3.4

60.6

43.7

Minor BPS

43.2

-0.5

1.8

49.39

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033171

40165221 - 40195232

30012

ENSAPLT00000028475

40165221 - 40193193

27973

ENSAPLT00000015838

40163450 - 40214772

51323