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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40179634_40183439_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40179634 - 40183439

Intron Length:

3806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGCCAG

U12 Branch Point Sequence:

GCCAGCCGAGCC

Flanking Amino Acid:

YKRLNRSHCQDINECLMQGL

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

82.5

Major BPS

40.5

-0.6

1.6

47.5

Major PPT

77.8

0.63

0.7

72.6

25.6

Minor 5ss

35.9

-1.6

3.3

47.8

47.9

Minor BPS

34.2

-1.2

37.43

39.8

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028475

40165221 - 40193193

27973

ENSAPLT00000015838

40163450 - 40214772

51323