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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40183555_40190654_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

40183555 - 40190654

Intron Length:

7100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGGACCGA

5'SS Class:

weak_major

3'SS Sequence:

CGCTGATGGGTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTGAT

U12 Branch Point Sequence:

AGGACGCTGATG

Flanking Amino Acid:

CCGSVGLFWGLCCLCPSLFA

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.5

0.08

1.1

40.1

42.2

Major BPS

63.8

0.34

1.2

54.7

43.1

Major PPT

50.6

0.01

1.1

46.3

40.6

Minor 5ss

29.3

-2.4

3.3

29.3

43.4

Minor BPS

38.1

-1

2.2

38.73

38.4

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028475

40165221 - 40193193

27973

ENSAPLT00000015838

40163450 - 40214772

51323