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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40193203_40194630_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40193203 - 40194630

Intron Length:

1428

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCCCCCAGC

5'SS Class:

major

3'SS Sequence:

AGACTTCTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAG

U12 Branch Point Sequence:

CCTTGCAGACTT

Flanking Amino Acid:

SGFRICEHPKIPCLNGGRCV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.9

0.28

1.3

56.9

44.4

Major BPS

50.8

0.02

1.5

37.5

Major PPT

62.7

0.29

1.1

54.8

Minor 5ss

29.3

-2.4

3.9

44.1

43.3

Minor BPS

39.9

-0.6

2.2

56.93

Associated Gene:

Gene:

LTBP2

Ensembl Gene ID:

ENSAPLG00000015140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033171

40165221 - 40195232

30012