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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40242648_40242832_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40242648 - 40242832

Intron Length:

185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTCGTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

TTCTGTCTGACT

Flanking Amino Acid:

LAIFDENELELLMCGTGDIS

Intron Amino Acid Position:

627

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

80.7

31.6

Major BPS

63.7

0.34

1.2

41.8

Major PPT

83.6

0.75

0.8

80.5

31.5

Minor 5ss

35.4

-1.7

3.2

50.9

45.5

Minor BPS

49.7

0.06

2.1

75.42

41.9

Associated Gene:

Gene:

AREL1

Ensembl Gene ID:

ENSAPLG00000001964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039308

40241112 - 40256072

14961

ENSAPLT00000002046

40241112 - 40256072

14961