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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40245204_40246933_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40245204 - 40246933

Intron Length:

1730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

GCTATTTTACTT

Flanking Amino Acid:

KVSRHCLLESSFKATRNFSV

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

77.9

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

93.1

0.97

0.6

18.6

Minor 5ss

31.3

-2.1

3.3

40.8

45.4

Minor BPS

49.7

0.05

1.6

64.1

41.3

Associated Gene:

Gene:

AREL1

Ensembl Gene ID:

ENSAPLG00000001964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002046

40241112 - 40256072

14961

ENSAPLT00000039308

40241112 - 40256072

14961