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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40247056_40247454_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40247056 - 40247454

Intron Length:

399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAGGGC

5'SS Class:

major

3'SS Sequence:

TTACCGTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAC

U12 Branch Point Sequence:

TTACCGTTCACA

Flanking Amino Acid:

TFIRSLHKNIGGSETFQDKV

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

66.2

39.3

Major BPS

59.1

0.23

1.2

52.7

42.9

Major PPT

74.4

0.55

0.9

68.1

37.3

Minor 5ss

28.9

-2.4

3.6

41.1

45.6

Minor BPS

49.2

-0

2.4

69.7

42.4

Associated Gene:

Gene:

AREL1

Ensembl Gene ID:

ENSAPLG00000001964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039308

40241112 - 40256072

14961

ENSAPLT00000002046

40241112 - 40256072

14961