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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40247597_40248088_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40247597 - 40248088

Intron Length:

492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGCTGCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TATGCATTAAAC

Flanking Amino Acid:

FTFRVCPGTKFSYLGPDPVH

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.8

81.3

32.8

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

75.2

0.57

70.2

41.3

Minor 5ss

33.3

-1.9

43.8

43.9

Minor BPS

58.5

0.25

1.8

70.45

40.2

Associated Gene:

Gene:

AREL1

Ensembl Gene ID:

ENSAPLG00000001964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039308

40241112 - 40256072

14961

ENSAPLT00000002046

40241112 - 40256072

14961