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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40248167_40249906_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40248167 - 40249906

Intron Length:

1740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACCA

5'SS Class:

strong_major

3'SS Sequence:

TGTGATTACTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TGACCTTTGACA

Flanking Amino Acid:

KKVYCYVSPKQFSVKEFYLK

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

74.4

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

0.43

66.2

44.1

Minor 5ss

32.2

-2

40.3

45.3

Minor BPS

0.5

1.2

69.58

36.1

Associated Gene:

Gene:

AREL1

Ensembl Gene ID:

ENSAPLG00000001964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039308

40241112 - 40256072

14961

ENSAPLT00000002046

40241112 - 40256072

14961