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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40250155_40250785_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40250155 - 40250785

Intron Length:

631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

CCGTTTCCTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

ATTTGTACAACT

Flanking Amino Acid:

NGDFDIIVLSENEKNIVERN

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

34.7

Major BPS

79.1

0.72

69.3

38.4

Major PPT

79.8

0.67

0.8

31.8

Minor 5ss

28.2

-2.5

2.7

28.9

37.2

Minor BPS

48.4

-0

2.2

75.59

41.1

Associated Gene:

Gene:

AREL1

Ensembl Gene ID:

ENSAPLG00000001964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039308

40241112 - 40256072

14961

ENSAPLT00000002046

40241112 - 40256072

14961