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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40250967_40251047_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40250967 - 40251047

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTGTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

GCCCTCTTCATT

Flanking Amino Acid:

EHNYSLSIHELGPQEEENSD

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

76.7

0.6

0.9

41.4

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

48.7

-0

1.7

60.97

43.5

Associated Gene:

Gene:

AREL1

Ensembl Gene ID:

ENSAPLG00000001964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039308

40241112 - 40256072

14961

ENSAPLT00000002046

40241112 - 40256072

14961