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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40251218_40252184_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40251218 - 40252184

Intron Length:

967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTACTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TGACTCTAAACT

Flanking Amino Acid:

YSPYYKVFQPGMVVPSKTKI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.1

39.5

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

81.1

0.7

0.8

78.6

34.6

Minor 5ss

33.4

-1.9

3.4

48.4

47.3

Minor BPS

59.6

0.38

1.7

74.9

41.4

Associated Gene:

Gene:

AREL1

Ensembl Gene ID:

ENSAPLG00000001964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039308

40241112 - 40256072

14961

ENSAPLT00000002046

40241112 - 40256072

14961