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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40252423_40253706_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40252423 - 40253706

Intron Length:

1284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGGGAA

5'SS Class:

major

3'SS Sequence:

ATTTCCCATGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

TTTTTCTCCATT

Flanking Amino Acid:

MAFRVHLFYKNGQPFP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.3

69.3

37.4

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

77.1

0.61

0.9

71.2

34.1

Minor 5ss

29.9

-2.3

3.5

36.4

41.5

Minor BPS

59.2

0.37

83.48

38.1

Associated Gene:

Gene:

AREL1

Ensembl Gene ID:

ENSAPLG00000001964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039308

40241112 - 40256072

14961

ENSAPLT00000002046

40241112 - 40256072

14961