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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40253934_40255811_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

40253934 - 40255811

Intron Length:

1878

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAACCAC

U12 Branch Point Sequence:

GCTGCTGCAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.6

32.3

Major BPS

44.3

-0.3

1.2

48.1

34.7

Major PPT

77.8

0.63

0.8

72.2

32.4

Minor 5ss

33.3

-1.9

3.5

48.8

47.4

Minor BPS

-0.4

2.2

54.58

43.9

Associated Gene:

Gene:

AREL1

Ensembl Gene ID:

ENSAPLG00000001964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002046

40241112 - 40256072

14961