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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40254655_40255811_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

40254655 - 40255811

Intron Length:

1157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGTCAT

U12 Branch Point Sequence:

TTGGACTGGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.6

32.3

Major BPS

59.3

0.23

1.4

63.4

44.3

Major PPT

80.8

0.69

0.9

73.5

41.9

Minor 5ss

33.3

-1.9

3.5

48.8

47.4

Minor BPS

0.11

1.9

72.87

Associated Gene:

Gene:

AREL1

Ensembl Gene ID:

ENSAPLG00000001964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039308

40241112 - 40256072

14961