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Intron Name: Anas_platyrhynchos_platyrhynchos_5_40259803_40259894_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40259803 - 40259894

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGGGG

5'SS Class:

major

3'SS Sequence:

CGTCTCGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CCCTGCTGACGG

Flanking Amino Acid:

MGKQKKARKYA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

56.6

42.5

Major BPS

66.3

0.4

1.1

41.8

Major PPT

75.5

0.57

0.9

68.7

37.2

Minor 5ss

23.3

-3.1

3.2

25.4

39.4

Minor BPS

36.5

-1.1

2.2

34.75

46.3

Associated Gene:

Gene:

FCF1

Ensembl Gene ID:

ENSAPLG00000002613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002648

40259800 - 40263062

3263